From 4338e0c3f69b37c9e9605f34cab66ef60478fb90 Mon Sep 17 00:00:00 2001 From: Audrey Yeo Date: Mon, 19 Oct 2026 10:08:32 +0200 Subject: [PATCH 1/2] Update installation instructions for phase1b --- README.rmd | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.rmd b/README.rmd index 5436758b..e3153e7f 100644 --- a/README.rmd +++ b/README.rmd @@ -23,7 +23,7 @@ The intended user is the early clinical trial statistician in the design and int You can install the development version of `phase1b` from [GitHub](https://github.com/) with: ``` r -# devtools::install_github("https://github.com/Genentech/phase1b/", force = TRUE) +pak::pak("https://github.com/Genentech/phase1b") library(phase1b) ``` From 9933bb40dc1f3ab2e18fde159329d836a0e63d01 Mon Sep 17 00:00:00 2001 From: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Date: Mon, 19 Oct 2026 08:13:00 +0000 Subject: [PATCH 2/2] [skip roxygen] [skip vbump] Roxygen Man Pages Auto Update --- DESCRIPTION | 2 +- man/Phase1b-package.Rd | 1 + man/plotDecision.Rd | 2 +- man/plotOc.Rd | 2 +- 4 files changed, 4 insertions(+), 3 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index aba92d1e..36392e3f 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -53,7 +53,6 @@ Language: en-US LazyData: true Roxygen: list(markdown = TRUE, packages = "roxytypes") -RoxygenNote: 7.3.3 Config/Needs/documentation: roxytypes Remotes: @@ -86,3 +85,4 @@ Collate: 'sumBetaDiff.R' 'sumTable.R' Config/testthat/edition: 3 +Config/roxygen2/version: 8.1.1 diff --git a/man/Phase1b-package.Rd b/man/Phase1b-package.Rd index b31c037f..755383b6 100644 --- a/man/Phase1b-package.Rd +++ b/man/Phase1b-package.Rd @@ -23,6 +23,7 @@ Useful links: Authors: \itemize{ + \item Daniel Sabanes Bove \email{daniel@rconis.com} \item Markus Elze \email{markus.elze@roche.com} \item Tony Pourmohamad \email{pourmoht@gene.com} \item Jiawen Zhu \email{zhu.jiawen@gene.com} diff --git a/man/plotDecision.Rd b/man/plotDecision.Rd index 434cee7a..c63149eb 100644 --- a/man/plotDecision.Rd +++ b/man/plotDecision.Rd @@ -14,7 +14,7 @@ plotDecision(data, efficacious_prob, futile_prob) \item{futile_prob}{(\code{number}):\cr a cut off for the probability of a poor improvement} } \value{ -\code{\link[ggplot2:ggplot]{ggplot2::ggplot()}} object +\code{\link[ggplot2:ggplot]{ggplot()}} object } \description{ This function will return a plot showing a curve of the probability of a meaningful improvement over estimated diff diff --git a/man/plotOc.Rd b/man/plotOc.Rd index 526944c4..0cedde4b 100644 --- a/man/plotOc.Rd +++ b/man/plotOc.Rd @@ -17,7 +17,7 @@ Different to \code{all_sizes} which is after the adjustment, if made.} \item{wiggle_status}{(\code{flag}):\cr from \code{wiggle} flag in object.} } \value{ -\code{\link[ggplot2:ggplot]{ggplot2::ggplot()}} object +\code{\link[ggplot2:ggplot]{ggplot()}} object } \description{ Plots results from simulated results of :