Refresh X-Mech Suite from October 7 pinned sources

[realmarcin]

Refresh the X-Mech Suite and repeated figures to one October 7 snapshot across all twelve Mechs. The page totals 1,082,896 records and seed families (+80), with 160 vocabularies, 56 overlap connections and 302 populated heatmap cells. The census and shared-term inclusion rules stay unchanged. The section icon bar now has an explicit Cross-refs shortcut and a Repo support shortcut to the Mech repository support matrix. The requested introductory sentences about established corpora, DUFMech and CLAW coordination are removed.

CLAW declares all twelve members. This refresh preserves the newer governance manifest already published on main at 73958ed (20:46 UTC), independently of the Mech data pins. DUFMech links open its native family pages; its corrected seed worklist contains 6,154 unknown candidates and 378 historical DUFs. The measured corpus remains the 6,532-row worklist, whose review coverage is untracked. Seven sourced cross-Mech imports are described as evidence leads with their retained acquisition pins.

Hand-checked changes and evidence:

Claim	Updated value	Evidence at the pins below
HabitatMech	3,207 records; 691 REVIEWED	pages/index.html and data/habitats
TraitMech	1,059 records; 45.0% embedded	pages/index.html and data/traits
PathwayMech	156 pathways; 7,307 edges; 16 taxa	pages/browse.html and data/pathways
CellStructureMech	906 records; 758 GO-grounded	pages/index.html and data/structures
NaturalProductMech	808 supported producer claims; 240 graph-bearing records, 567 resolved graphs	README.md, owner records and 159 validated graph components
DUFMech	Native schema, browser and history; seven imported evidence-lead sources	October 5 seed manifest, October 6 cross-Mech manifest and FamilyRecord schema
CLAW	12 members, 20 governed artifacts, 26 capabilities	fleet.yaml and vendored_artifacts.json

Re-audited 24 website features across all twelve live sites, independently checked changed ratings and resolved disagreements against the existing criteria. Successful deployment revisions and per-feature evidence are recorded in site_features.json. The newer DUF-only recheck from main is retained with its own date, scope and deployment; the baseline audit for the other eleven sites is October 7. HabitatMech was the initial audit canary, with an independent complete route/layout sweep; other sites used representative templates, navigation, control and failure checks. Live deployments are separate from the corpus pins. TraitMech grew to 1,060 during the audit; its card and census stay at 1,059. The pre-PR and post-merge-resolution live checks now observe 1,062, within the documented grace window.

Validation: 205 unit tests pass; generated-page, snapshot-manifest and live-manifest checks pass; the live card check reports 11 exact matches and the expected TraitMech growth warning. All 302 heatmap asset hashes and all source revisions were verified. A local Kramdown-rendered Chrome preview checked graph selection, refreshed cell links, empty cells and 390 px layout with no JavaScript errors. Navigation checks also validated all eleven section anchors and exercised both requested shortcuts at 1440, 1024, 768 and 390 px. A full Jekyll build was unavailable because its dependencies are not installed. Independent local review found and fixed two stale DUF descriptions; no unresolved review findings remain. The conflicts with main were resolved while preserving its newer DUF governance and audit presentation, provenance validation, and contrast fixes; independent review confirmed that the original Mech pins and derived corpus assets remain unchanged.

Mech data pinned at 2026-10-07T19:36:48.761841+00:00; CLAW uses the separately refreshed governance pin noted above:

• HabitatMech: 38818a8a62b1f1abe40214da0ad56a096af42e1f
• CommunityMech: fe1752572a688051e8105e5b89d3099fe2202c63
• TraitMech: 8e9a7b7c121e41e595c6161e6c0e925b6b42ec17
• PathwayMech: ff3e716843ba8ff27970b2ba028fae328d1f9569
• CellStructureMech: 7aaacbfc620dcf5f8308199035088fc374066fe4
• ProteinTraitsMech: 8ad92e55ed3ed65e3d95598c798c4916e7f1663e
• DUFMech: f97ed39db701b1912d29b07479db65b37e15867c
• NaturalProductMech: f3bfec397457a22fd0118ba9d7f6a53d0e4fa7cc
• AntibioticMech: 87653291542ce22ab7b714b67bc3dc97137e2f38
• MediaIngredientMech: 401a2ff8b92203008fcaeb7bfcf4b845b64fc6d0
• CultureMech: 26c8ba8e8d1c49ee9a118726b6facd584e7bb0fd
• TaxonMech: 555300c6198962db11fff3a6eb3855c36413af0d
• culturebotai-claw: 73958edb97994bc16c5404443956ee64c47bfe9b

Snapshot: /private/tmp/xmech-20261007-d5rc8abk/xmech-refresh-20261007, 5.9 GB. Retain for review fixes; remove after an approved merge. No methodology expansion or kg-microbe ingestion claim is included.