update overview of available software

docs/available_software/detail/CD-HIT.md

@@ -39,4 +39,5 @@ json_ld:
 
 |CD-HIT version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
 | --- | --- | --- | --- | --- |
+|4.8.1|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`CD-HIT/4.8.1-GCC-14.2.0`|
 |4.8.1|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202306">2023.06</span>|`CD-HIT/4.8.1-GCC-12.2.0`|

docs/available_software/detail/CastXML.md

@@ -0,0 +1,40 @@
+---
+json_ld:
+  '@context': https://schema.org
+  '@type': SoftwareApplication
+  applicationCategory: DeveloperApplication
+  description: CastXML is a C-family abstract syntax tree XML output tool.
+  license: Not confirmed
+  name: CastXML
+  offers:
+    '@type': Offer
+    price: 0
+  operatingSystem: LINUX
+  review:
+    '@type': Review
+    author:
+      '@type': Organization
+      name: EESSI
+    reviewBody: Application has been successfully made available on all architectures
+      supported by EESSI
+    reviewRating:
+      '@type': Rating
+      ratingValue: 5
+  softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
+    on your system
+  softwareVersion: '[''0.6.13'']'
+  url: https://github.com/CastXML/CastXML
+---
+# CastXML
+
+
+CastXML is a C-family abstract syntax tree XML output tool.
+
+<small>homepage: </small><span class="software-link">[https://github.com/CastXML/CastXML](https://github.com/CastXML/CastXML)</span>
+
+## Available installations
+
+
+|CastXML version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
+| --- | --- | --- | --- | --- |
+|0.6.13|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`CastXML/0.6.13-GCCcore-14.2.0`|

docs/available_software/detail/Cereal.md

@@ -49,4 +49,5 @@ used standalone.
 
 |Cereal version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
 | --- | --- | --- | --- | --- |
+|1.3.2|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`Cereal/1.3.2-GCCcore-14.3.0`|
 |1.3.2|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202306">2023.06</span>|`Cereal/1.3.2`|

docs/available_software/detail/HPCG.md

@@ -0,0 +1,45 @@
+---
+json_ld:
+  '@context': https://schema.org
+  '@type': SoftwareApplication
+  applicationCategory: DeveloperApplication
+  description: "The HPCG Benchmark project is an effort to create a more relevant\
+    \ metric for ranking HPC systems than\n the High Performance LINPACK (HPL) benchmark,\
+    \ that is currently used by the TOP500 benchmark."
+  license: Not confirmed
+  name: HPCG
+  offers:
+    '@type': Offer
+    price: 0
+  operatingSystem: LINUX
+  review:
+    '@type': Review
+    author:
+      '@type': Organization
+      name: EESSI
+    reviewBody: Application has been successfully made available on all architectures
+      supported by EESSI
+    reviewRating:
+      '@type': Rating
+      ratingValue: 5
+  softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
+    on your system
+  softwareVersion: '[''3.1'']'
+  url: https://software.sandia.gov/hpcg
+---
+# HPCG
+
+
+The HPCG Benchmark project is an effort to create a more relevant metric for ranking HPC systems than
+ the High Performance LINPACK (HPL) benchmark, that is currently used by the TOP500 benchmark.
+
+<small>homepage: </small><span class="software-link">[https://software.sandia.gov/hpcg](https://software.sandia.gov/hpcg)</span>
+
+## Available installations
+
+
+|HPCG version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
+| --- | --- | --- | --- | --- |
+|3.1|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`HPCG/3.1-lfoss-2025b`|
+|3.1|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`HPCG/3.1-foss-2025b`|
+|3.1|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`HPCG/3.1-foss-2025a`|

docs/available_software/detail/HPL.md

@@ -42,4 +42,6 @@ HPL is a software package that solves a (random) dense linear system in double p
 
 |HPL version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
 | --- | --- | --- | --- | --- |
+|2.3|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`HPL/2.3-foss-2025b`|
+|2.3|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`HPL/2.3-foss-2025a`|
 |2.3|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202306">2023.06</span>|`HPL/2.3-foss-2023b`|

docs/available_software/detail/MCL.md

@@ -44,4 +44,5 @@ on simulation of (stochastic) flow in graphs.
 
 |MCL version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
 | --- | --- | --- | --- | --- |
+|22.282|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`MCL/22.282-GCCcore-14.2.0`|
 |22.282|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202306">2023.06</span>|`MCL/22.282-GCCcore-12.3.0`|

docs/available_software/detail/NTL.md

@@ -0,0 +1,47 @@
+---
+json_ld:
+  '@context': https://schema.org
+  '@type': SoftwareApplication
+  applicationCategory: DeveloperApplication
+  description: 'NTL is a high-performance, portable C++ library providing data structures
+    and
+
+    algorithms for manipulating signed, arbitrary length integers, and for vectors,
+
+    matrices, and polynomials over the integers and over finite fields.'
+  license: Not confirmed
+  name: NTL
+  offers:
+    '@type': Offer
+    price: 0
+  operatingSystem: LINUX
+  review:
+    '@type': Review
+    author:
+      '@type': Organization
+      name: EESSI
+    reviewBody: Application has been successfully made available on all architectures
+      supported by EESSI
+    reviewRating:
+      '@type': Rating
+      ratingValue: 5
+  softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
+    on your system
+  softwareVersion: '[''11.5.1'']'
+  url: https://shoup.net/ntl/
+---
+# NTL
+
+
+NTL is a high-performance, portable C++ library providing data structures and
+algorithms for manipulating signed, arbitrary length integers, and for vectors,
+matrices, and polynomials over the integers and over finite fields.
+
+<small>homepage: </small><span class="software-link">[https://shoup.net/ntl/](https://shoup.net/ntl/)</span>
+
+## Available installations
+
+
+|NTL version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
+| --- | --- | --- | --- | --- |
+|11.5.1|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`NTL/11.5.1-GCC-14.3.0`|

docs/available_software/detail/TRF.md

@@ -0,0 +1,40 @@
+---
+json_ld:
+  '@context': https://schema.org
+  '@type': SoftwareApplication
+  applicationCategory: DeveloperApplication
+  description: 'Tandem Repeats Finder: a program to analyze DNA sequences.'
+  license: Not confirmed
+  name: TRF
+  offers:
+    '@type': Offer
+    price: 0
+  operatingSystem: LINUX
+  review:
+    '@type': Review
+    author:
+      '@type': Organization
+      name: EESSI
+    reviewBody: Application has been successfully made available on all architectures
+      supported by EESSI
+    reviewRating:
+      '@type': Rating
+      ratingValue: 5
+  softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
+    on your system
+  softwareVersion: '[''4.09.1'']'
+  url: https://tandem.bu.edu/trf/trf.html
+---
+# TRF
+
+
+Tandem Repeats Finder: a program to analyze DNA sequences.
+
+<small>homepage: </small><span class="software-link">[https://tandem.bu.edu/trf/trf.html](https://tandem.bu.edu/trf/trf.html)</span>
+
+## Available installations
+
+
+|TRF version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
+| --- | --- | --- | --- | --- |
+|4.09.1|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`TRF/4.09.1-GCCcore-14.2.0`|

docs/available_software/detail/ecBuild.md

@@ -26,7 +26,7 @@ json_ld:
       ratingValue: 5
   softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
     on your system
-  softwareVersion: '[''3.8.0'']'
+  softwareVersion: '[''3.11.0'', ''3.8.0'']'
   url: https://ecbuild.readthedocs.io/
 ---
 # ecBuild
@@ -43,4 +43,5 @@ functions that ease the managing of software build systems
 
 |ecBuild version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
 | --- | --- | --- | --- | --- |
+|3.11.0|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`ecBuild/3.11.0-GCCcore-14.2.0`|
 |3.8.0|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202306">2023.06</span>|`ecBuild/3.8.0`|

docs/available_software/detail/libfyaml.md

@@ -0,0 +1,44 @@
+---
+json_ld:
+  '@context': https://schema.org
+  '@type': SoftwareApplication
+  applicationCategory: DeveloperApplication
+  description: 'Fully feature complete YAML parser and emitter, supporting the latest
+    YAML spec and passing the
+
+    full YAML testsuite.'
+  license: Not confirmed
+  name: libfyaml
+  offers:
+    '@type': Offer
+    price: 0
+  operatingSystem: LINUX
+  review:
+    '@type': Review
+    author:
+      '@type': Organization
+      name: EESSI
+    reviewBody: Application has been successfully made available on all architectures
+      supported by EESSI
+    reviewRating:
+      '@type': Rating
+      ratingValue: 5
+  softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
+    on your system
+  softwareVersion: '[''0.9'']'
+  url: https://github.com/pantoniou/libfyaml
+---
+# libfyaml
+
+
+Fully feature complete YAML parser and emitter, supporting the latest YAML spec and passing the
+full YAML testsuite.
+
+<small>homepage: </small><span class="software-link">[https://github.com/pantoniou/libfyaml](https://github.com/pantoniou/libfyaml)</span>
+
+## Available installations
+
+
+|libfyaml version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
+| --- | --- | --- | --- | --- |
+|0.9|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`libfyaml/0.9-GCCcore-14.2.0`|

docs/available_software/detail/libspatialindex.md

@@ -22,7 +22,7 @@ json_ld:
       ratingValue: 5
   softwareRequirements: See https://www.eessi.io/docs/ for how to make EESSI available
     on your system
-  softwareVersion: '[''1.9.3'']'
+  softwareVersion: '[''2.1.0'', ''1.9.3'']'
   url: https://libspatialindex.org
 ---
 # libspatialindex
@@ -37,4 +37,5 @@ C++ implementation of R*-tree, an MVR-tree and a TPR-tree with C API
 
 |libspatialindex version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
 | --- | --- | --- | --- | --- |
+|2.1.0|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`libspatialindex/2.1.0-GCCcore-14.3.0`|
 |1.9.3|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202306">2023.06</span>|`libspatialindex/1.9.3-GCCcore-13.2.0`|

docs/available_software/detail/pkgconfig.md

@@ -38,6 +38,7 @@ pkgconfig is a Python module to interface with the pkg-config command line tool
 
 |pkgconfig version|Supported CPU targets|Supported GPU targets|EESSI version|Module|
 | --- | --- | --- | --- | --- |
+|1.5.5|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`, `zen5`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202506">2025.06</span>|`pkgconfig/1.5.5-GCCcore-14.3.0-python`|
 |1.5.5|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202306">2023.06</span>|`pkgconfig/1.5.5-GCCcore-13.2.0-python`|
 |1.5.5|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202306">2023.06</span>|`pkgconfig/1.5.5-GCCcore-12.3.0-python`|
 |1.5.5|`generic`: `aarch64`, `x86_64`<br/><span class="software-cpu-arm">Arm</span>: `a64fx`, `neoverse_n1`, `neoverse_v1`, `nvidia/grace`<br/><span class="software-cpu-amd">AMD</span>: `zen2`, `zen3`, `zen4`<br/><span class="software-cpu-intel">Intel</span>: `haswell`, `skylake_avx512`, `sapphirerapids`, `icelake`, `cascadelake`<br/>|*(none)*|<span class="software-eessi-version-202306">2023.06</span>|`pkgconfig/1.5.5-GCCcore-12.2.0-python`|