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the GMOD database schema
PLpgSQL 47 22
Source code for JBrowse 2, a modern React-based genome browser
TypeScript 292 87
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
JavaScript 473 199
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
Groovy 140 86
Source code for the JBrowse 2 genome hubs webite and data processing scripts
Monorepo for Apollo 3 server-side and client-side (JBrowse 2 plugin) components.
R interface to the JBrowse 2 Linear Genome View.
JBrowse 2 linear genome view as an anywidget for notebooks (GPU-rendered)
Read UCSC Trix indexes in pure JavaScript
Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi
Read .2bit files with pure JS. Works in node or webpack.
Read CRAM v3 and v2 in node or in the browser
Parser for bigwig and bigbed files
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