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AGFS-Tractometry

This repository releases the source code, pre-created template and testing sample (HC and MDD) for the work related to our ongoing study on a novel approach for finer-scale tractometry using dMRI. image.png

Function

  • create_tract_centroid: This script is designed to calculate the central line of WM tracts.

  • extract_tract_neighborhood: This module extracts the neighborhood of a given tract.

  • compute_diffusion_metrics: Computes various diffusion metrics for tractometry.

  • clique_percolation_algorithm: Implements the clique percolation method(CPM) for community detection in tractometry.

Usage

  1. Clone the repository:
    git clone https://github.com/ZhengRuixi/AGFS-Tractometry.git
    cd AGFS-Tractometry

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