Issues

• ggdiffclade-No documentation for ‘offspring.tbl_tree_item’ in specified packages and libraries

  YuLab-SMU/MicrobiotaProcess#136 · Filter by author Balakulandai opened on Dec 5, 2025

• Exporting rarefied matrix from mpse object?

  YuLab-SMU/MicrobiotaProcess#134 · Filter by author EsbergA opened on May 19, 2025

• Could the function mp_plot_alpha() display the statistical value of the non-parametric tests ?

  YuLab-SMU/MicrobiotaProcess#133 · Filter by author gregnoel opened on May 15, 2025

• Bracken to MPSE

  YuLab-SMU/MicrobiotaProcess#132 · Filter by author Alexa2279 opened on Apr 14, 2025

• could you provide your custom color palette?

  YuLab-SMU/MicrobiotaProcess#131 · Filter by author linfanxiao opened on Feb 14, 2025

• Extract abundance of mp_diff_analysis results

  YuLab-SMU/MicrobiotaProcess#130 · Filter by author faboulazm opened on Feb 3, 2025

• How do I get the same color as the species map ?

  YuLab-SMU/MicrobiotaProcess#129 · Filter by author 1870694249 opened on Dec 28, 2024

• Error in seq_len: argument must be coercible to non-negative integer

  YuLab-SMU/MicrobiotaProcess#128 · Filter by author Laxmi0001 opened on Dec 24, 2024

• R crash when mp is opened

  YuLab-SMU/MicrobiotaProcess#127 · Filter by author Fla1487 opened on Nov 27, 2024

• error while running mp_balance_clade

  YuLab-SMU/MicrobiotaProcess#126 · Filter by author tejms opened on Nov 21, 2024

• Import phyloseq tax_table deactivating fillNAtax

  YuLab-SMU/MicrobiotaProcess#125 · Filter by author sarpiens opened on Nov 7, 2024

• alpha index statistics

  YuLab-SMU/MicrobiotaProcess#124 · Filter by author altuda opened on Sep 15, 2024

• Issue in ggdiffclade

  YuLab-SMU/MicrobiotaProcess#123 · Filter by author scoob24 opened on Jul 24, 2024
  1

• rarefy Abundance and rare abundance

  YuLab-SMU/MicrobiotaProcess#122 · Filter by author Muneer111 opened on May 6, 2024

• Exporting MPSE generated variables

  YuLab-SMU/MicrobiotaProcess#121 · Filter by author EsbergA opened on May 5, 2024
  2

• Using mp_diff_analysis for FAPROTAX functional data and visualization

  YuLab-SMU/MicrobiotaProcess#120 · Filter by author MizaR108 opened on May 1, 2024

• 如何通过物种丰度矩阵，物种分类表，样本分组信息构建MPSE对象

  YuLab-SMU/MicrobiotaProcess#118 · Filter by author zyc134 opened on Apr 12, 2024

• ggrarecurve报错Error in if (obj %>% rowSums %>% var != 0 && !force)

  YuLab-SMU/MicrobiotaProcess#117 · Filter by author Elixir0822 opened on Apr 7, 2024
  1

• Report: Large memory usage when run mp_cal_abundance

  YuLab-SMU/MicrobiotaProcess#115 · Filter by author alienzj opened on Mar 5, 2024
  1

• Possible to calculate diff_analysis with less than 5 sample per group ?

  YuLab-SMU/MicrobiotaProcess#113 · Filter by author UpalabdhaD opened on Dec 22, 2023
  2

• add labels to plot from ggrarecurve

  YuLab-SMU/MicrobiotaProcess#111 · Filter by author soluna1 opened on Dec 13, 2023

• diff_analysis with multiple groups

  YuLab-SMU/MicrobiotaProcess#110 · Filter by author dalferes opened on Dec 5, 2023

• diff_analysis without rarefying

  YuLab-SMU/MicrobiotaProcess#109 · Filter by author cmetadea opened on Dec 5, 2023

• diff_analysis in ver 1.14.0

  YuLab-SMU/MicrobiotaProcess#108 · Filter by author RIJP-SU opened on Dec 1, 2023

• Confidance interval returns NA values

  YuLab-SMU/MicrobiotaProcess#107 · Filter by author sirusb opened on Nov 9, 2023