chore: remove copier answers and install from uv.lock with --locked

.github/CLAUDE.md

@@ -141,7 +141,7 @@ than copying), `track_progress`, `use_sticky_comment`. Model is
 `claude-sonnet-4-5-20250929`.
 
 **Setup**: installs `uv`, dev tools (`_install_dev_tools.bash`),
-`uv sync --all-extras --frozen`, headless display. Only secret available is
+`uv sync --all-extras --locked`, headless display. Only secret available is
 `ANTHROPIC_API_KEY` — Claude Code workflows intentionally have **no** platform
 or GCP credentials.
 

.github/workflows/_audit.yml

@@ -30,7 +30,7 @@ jobs:
 
       - name: Install Python, venv and dependencies
         shell: bash
-        run: uv sync --all-extras --frozen --link-mode=copy
+        run: uv sync --all-extras --locked --link-mode=copy
 
       - name: Audit
         shell: bash

.github/workflows/_claude-code.yml

@@ -63,7 +63,7 @@ jobs:
 
       - name: Install Python, venv and dependencies
         shell: bash
-        run: uv sync --all-extras --frozen --link-mode=copy
+        run: uv sync --all-extras --locked --link-mode=copy
 
       - name: Setup display
         uses: pyvista/setup-headless-display-action@10e6efb97af3cd1523828f0e22c39f0e4567f3e4 # v5.2
@@ -72,7 +72,7 @@ jobs:
         if: ${{ !startsWith(github.ref, 'refs/tags/v') }}
         shell: bash
         run: |
-          TOML_VERSION=$(uv run --frozen python -c "import tomli; print(tomli.load(open('pyproject.toml', 'rb'))['project']['version'])")
+          TOML_VERSION=$(uv run --locked python -c "import tomli; print(tomli.load(open('pyproject.toml', 'rb'))['project']['version'])")
           echo "Development build - Current version in pyproject.toml: $TOML_VERSION"
 
       - name: Run Claude Code (Interactive Mode)

.github/workflows/_docs.yml

@@ -30,7 +30,7 @@ jobs:
 
       - name: Install Python, venv and dependencies
         shell: bash
-        run: uv sync --all-extras --frozen --link-mode=copy
+        run: uv sync --all-extras --locked --link-mode=copy
 
       - name: Docs
         shell: bash

.github/workflows/_lint.yml

@@ -30,7 +30,7 @@ jobs:
 
       - name: Install Python, venv and dependencies
         shell: bash
-        run: uv sync --all-extras --frozen --link-mode=copy
+        run: uv sync --all-extras --locked --link-mode=copy
 
       - name: Lint
         shell: bash

.github/workflows/_package-publish.yml

@@ -61,12 +61,12 @@ jobs:
 
       - name: Install Python, venv and dependencies
         shell: bash
-        run: uv sync --all-extras --frozen --link-mode=copy
+        run: uv sync --all-extras --locked --link-mode=copy
 
       - name: Validate installation
         shell: bash
         run: |
-          OUTPUT=$(uv run --frozen --all-extras --no-dev aignostics --help)
+          OUTPUT=$(uv run --locked --all-extras --no-dev aignostics --help)
           if [[ "$OUTPUT" != *"built with love in Berlin"* ]]; then
           echo "Output does not contain 'built with love in Berlin'"
           exit 1
@@ -149,7 +149,7 @@ jobs:
       - name: Final smoke test
         shell: bash
         run: |
-          uv run --frozen --no-dev aignostics --help
+          uv run --locked --no-dev aignostics --help
 
       - name: Docs
         shell: bash

.github/workflows/_scheduled-audit.yml

@@ -31,7 +31,7 @@ jobs:
 
       - name: Install Python, venv and dependencies
         shell: bash
-        run: uv sync --all-extras --frozen --link-mode=copy
+        run: uv sync --all-extras --locked --link-mode=copy
 
       - name: Audit
         shell: bash

.github/workflows/_scheduled-test-daily.yml

@@ -66,7 +66,7 @@ jobs:
 
       - name: Install Python, venv and dependencies
         shell: bash
-        run: uv sync --all-extras --frozen --link-mode=copy
+        run: uv sync --all-extras --locked --link-mode=copy
 
       # Need xdisplay for testing QuPath app integration
       - name: Setup display
@@ -76,7 +76,7 @@ jobs:
         if: ${{ !startsWith(github.ref, 'refs/tags/v') }}
         shell: bash
         run: |
-          TOML_VERSION=$(uv run --frozen python -c "import tomli; print(tomli.load(open('pyproject.toml', 'rb'))['project']['version'])")
+          TOML_VERSION=$(uv run --locked python -c "import tomli; print(tomli.load(open('pyproject.toml', 'rb'))['project']['version'])")
           echo "Development build - Current version in pyproject.toml: $TOML_VERSION"
 
       - name: Create .env file
@@ -108,7 +108,7 @@ jobs:
         continue-on-error: true
         shell: bash
         run: |
-            OUTPUT=$(uv run --frozen --no-dev aignostics --help)
+            OUTPUT=$(uv run --locked --no-dev aignostics --help)
             if [[ "$OUTPUT" != *"built with love in Berlin"* ]]; then
             echo "Output does not contain 'built with love in Berlin'"
             exit 1
@@ -119,12 +119,12 @@ jobs:
         continue-on-error: true
         shell: bash
         run: |
-          uv run --frozen --no-dev aignostics --help
-          uv run --frozen --all-extras aignostics system info
-          uv run --frozen --all-extras aignostics system health
-          uv run --frozen --all-extras aignostics user whoami --mask-secrets
-          uv run --frozen --all-extras aignostics application list
-          uv run --frozen --all-extras aignostics application run list --verbose --limit 1
+          uv run --locked --no-dev aignostics --help
+          uv run --locked --all-extras aignostics system info
+          uv run --locked --all-extras aignostics system health
+          uv run --locked --all-extras aignostics user whoami --mask-secrets
+          uv run --locked --all-extras aignostics application list
+          uv run --locked --all-extras aignostics application run list --verbose --limit 1
 
       - name: Test / Unit (multiple Python versions)
         id: unit

.github/workflows/_scheduled-test-hourly.yml

@@ -64,7 +64,7 @@ jobs:
 
       - name: Install Python, venv and dependencies
         shell: bash
-        run: uv sync --all-extras --frozen --link-mode=copy
+        run: uv sync --all-extras --locked --link-mode=copy
 
       - name: Create .env file
         uses: SpicyPizza/create-envfile@ace6d4f5d7802b600276c23ca417e669f1a06f6f # v2.0.3

.github/workflows/_scheduled-test-stress.yml

@@ -60,7 +60,7 @@ jobs:
 
       - name: Install Python, venv and dependencies
         shell: bash
-        run: uv sync --all-extras --frozen --link-mode=copy
+        run: uv sync --all-extras --locked --link-mode=copy
 
       - name: Create .env file
         uses: SpicyPizza/create-envfile@ace6d4f5d7802b600276c23ca417e669f1a06f6f # v2.0.3

.github/workflows/_test.yml

@@ -91,7 +91,7 @@ jobs:
 
       - name: Install Python, venv and dependencies
         shell: bash
-        run: uv sync --all-extras --frozen --link-mode=copy
+        run: uv sync --all-extras --locked --link-mode=copy
 
       # Need xdisplay for testing QuPath app integration
       - name: Setup display
@@ -102,7 +102,7 @@ jobs:
         shell: bash
         run: |
           TAG_VERSION=${GITHUB_REF#refs/tags/v}
-          TOML_VERSION=$(uv run --frozen python -c "import tomli; print(tomli.load(open('pyproject.toml', 'rb'))['project']['version'])")
+          TOML_VERSION=$(uv run --locked python -c "import tomli; print(tomli.load(open('pyproject.toml', 'rb'))['project']['version'])")
           if [ "$TAG_VERSION" != "$TOML_VERSION" ]; then
             echo "Release version mismatch: Tag $TAG_VERSION != pyproject.toml $TOML_VERSION"
             exit 1
@@ -112,7 +112,7 @@ jobs:
         if: ${{ !startsWith(github.ref, 'refs/tags/v') }}
         shell: bash
         run: |
-          TOML_VERSION=$(uv run --frozen python -c "import tomli; print(tomli.load(open('pyproject.toml', 'rb'))['project']['version'])")
+          TOML_VERSION=$(uv run --locked python -c "import tomli; print(tomli.load(open('pyproject.toml', 'rb'))['project']['version'])")
           echo "Development build - Current version in pyproject.toml: $TOML_VERSION"
 
       - name: Create .env file
@@ -142,7 +142,7 @@ jobs:
       - name: Validate installation (single Python version)
         shell: bash
         run: |
-            OUTPUT=$(uv run --frozen --no-dev aignostics --help)
+            OUTPUT=$(uv run --locked --no-dev aignostics --help)
             if [[ "$OUTPUT" != *"built with love in Berlin"* ]]; then
             echo "Output does not contain 'built with love in Berlin'"
             exit 1
@@ -151,12 +151,12 @@ jobs:
       - name: Test / Smoke (single Python version)
         shell: bash
         run: |
-          uv run --frozen --no-dev aignostics --help
-          uv run --frozen --all-extras aignostics system info
-          uv run --frozen --all-extras aignostics system health
-          uv run --frozen --all-extras aignostics user whoami --mask-secrets
-          uv run --frozen --all-extras aignostics application list
-          uv run --frozen --all-extras aignostics application run list --verbose --limit 1
+          uv run --locked --no-dev aignostics --help
+          uv run --locked --all-extras aignostics system info
+          uv run --locked --all-extras aignostics system health
+          uv run --locked --all-extras aignostics user whoami --mask-secrets
+          uv run --locked --all-extras aignostics application list
+          uv run --locked --all-extras aignostics application run list --verbose --limit 1
 
       # All test steps use continue-on-error: true so that every test suite
       # always runs regardless of whether earlier suites failed. This ensures

.github/workflows/prepare-release.yml

@@ -81,7 +81,7 @@ jobs:
         run: git checkout -b "${{ steps.version.outputs.branch_name }}"
 
       - name: Bump version
-        run: uv run --frozen bump-my-version bump --new-version "${{ steps.version.outputs.new_version }}"
+        run: uv run --locked bump-my-version bump --new-version "${{ steps.version.outputs.new_version }}"
 
       - name: Push release branch
         run: git push -u origin "${{ steps.version.outputs.branch_name }}"

.github/workflows/publish-release.yml

@@ -82,7 +82,7 @@ jobs:
           cache-dependency-glob: uv.lock
 
       - name: Install dependencies
-        run: uv sync --frozen
+        run: uv sync --locked
 
       - name: Read version info
         id: version
@@ -105,9 +105,9 @@ jobs:
           PREV_TAG="${{ steps.version.outputs.prev_tag }}"
           TAG_NAME="${{ steps.version.outputs.tag_name }}"
           if [ -n "$PREV_TAG" ]; then
-            uv run --frozen git-cliff --tag "$TAG_NAME" --prepend CHANGELOG.md "${PREV_TAG}..HEAD"
+            uv run --locked git-cliff --tag "$TAG_NAME" --prepend CHANGELOG.md "${PREV_TAG}..HEAD"
           else
-            uv run --frozen git-cliff --tag "$TAG_NAME" --output CHANGELOG.md
+            uv run --locked git-cliff --tag "$TAG_NAME" --output CHANGELOG.md
           fi
 
       - name: Commit changelog

.readthedocs.yml

@@ -33,6 +33,6 @@ build:
       - asdf global uv latest
       - echo $READTHEDOCS_VIRTUALENV_PATH
       - . ${READTHEDOCS_VIRTUALENV_PATH}/bin/activate
-      - UV_PROJECT_ENVIRONMENT=$READTHEDOCS_VIRTUALENV_PATH uv sync --frozen --all-extras
+      - UV_PROJECT_ENVIRONMENT=$READTHEDOCS_VIRTUALENV_PATH uv sync --locked --all-extras
     post_install:
       - npm install -g --ignore-scripts @mermaid-js/mermaid-cli

CONTRIBUTING.md

@@ -214,14 +214,6 @@ Notes:
 pinact run  # See https://dev.to/suzukishunsuke/pin-github-actions-to-a-full-length-commit-sha-for-security-2n7p
 ```
 
-## Update from Template
-
-Update project to latest version of [oe-python-template](https://github.com/helmut-hoffer-von-ankershoffen/oe-python-template) template.
-
-```shell
-make update_from_template
-```
-
 ## Custom Metadata
 
 When submitting application runs to the Aignostics Platform, you can attach custom metadata to provide additional context, tracking information, or control flags. The SDK itself automatically attaches structured metadata to every run, which includes:

Makefile

@@ -21,7 +21,7 @@ $(error Python version validation failed. See error message above.)
 endif
 
 # Define all PHONY targets
-.PHONY: act all audit clean codegen dist dist_native docs gui_watch install lint lint_fix merge-release pre_commit_run_all prepare-release profile publish-release setup test test_coverage_reset test_default test_e2e test_e2e_matrix test_integration test_integration_matrix test_long_running test_scheduled test_stress test_sequential test_unit test_unit_matrix test_very_long_running update_from_template
+.PHONY: act all audit clean codegen dist dist_native docs gui_watch install lint lint_fix merge-release pre_commit_run_all prepare-release profile publish-release setup test test_coverage_reset test_default test_e2e test_e2e_matrix test_integration test_integration_matrix test_long_running test_scheduled test_stress test_sequential test_unit test_unit_matrix test_very_long_running
 
 
 # Main target i.e. default sessions defined in noxfile.py
@@ -47,7 +47,7 @@ else \
 fi
 
 ## Individual Nox sessions
-act audit dist docs lint lint_fix setup test update_from_template:
+act audit dist docs lint lint_fix setup test:
 	$(nox-cmd)
 
 # Standalone targets
@@ -247,6 +247,5 @@ help:
 	@echo "  test_sequential       - Run tests marked as sequential (python version defined in .python-version)"
 	@echo "  test_scheduled        - Run tests marked as scheduled (python version defined in .python-version)"
 	@echo "  test_coverage_reset   - Reset test coverage data"
-	@echo "  update_from_template  - Update from template using copier"
 	@echo ""
 	@echo "Built with love in Berlin 🐻"

install.bash

@@ -68,7 +68,7 @@ LINUX_BREW_TOOLS=(
 )
 
 UV_TOOLS=(
-    "copier;copier;https://copier.readthedocs.io/;local"
+    # uv tools will be added here
 )
 
 PNPM_TOOLS=(

noxfile.py

@@ -8,7 +8,6 @@
 from pathlib import Path
 
 import nox
-import tomli
 from nox.command import CommandFailed
 
 nox.options.reuse_existing_virtualenvs = True
@@ -78,7 +77,7 @@ def _get_test_python_versions() -> list[str]:
 
 def _setup_venv(session: nox.Session, all_extras: bool = True, no_dev: bool = False) -> None:
     """Install dependencies for the given session using uv."""
-    args = ["uv", "sync", "--frozen"]
+    args = ["uv", "sync", "--locked"]
     if all_extras:
         args.append("--all-extras")
     if no_dev:
@@ -962,28 +961,6 @@ def setup(session: nox.Session) -> None:
         session.run("git", "add", ".", external=True)
 
 
-@nox.session(default=False)
-def update_from_template(session: nox.Session) -> None:
-    """Update from copier template."""
-    if Path("copier.yaml").is_file() or Path("copier.yml").is_file():
-        # Read the current version from pyproject.toml
-        with Path("pyproject.toml").open("rb") as f:
-            pyproject = tomli.load(f)
-            current_version = pyproject["tool"]["bumpversion"]["current_version"]
-            # In this case the project itself is the template
-            session.run("copier", "copy", "-r", "HEAD", ".", ".", "--force", "--trust", "--skip-tasks", external=True)
-            # Bump the version using the current version from pyproject.toml
-            session.run("bump-my-version", "replace", "--new-version", current_version, "--allow-dirty", external=True)
-    else:
-        # In this case the template has been generated from a template
-        session.run("copier", "update", "--trust", "--skip-answered", "--skip-tasks", external=True)
-
-        # Schedule the lint session to run after this session completes
-        session.notify("audit")
-        session.notify("docs")
-        session.notify("lint")
-
-
 @nox.session(default=False)
 def act(session: nox.Session) -> None:
     """Run GitHub Actions workflow locally with act."""

renovate.json

@@ -107,12 +107,6 @@
 
   // ---- Repo rules: they deviate from the org config ----
 
-  // The template source uses the gh: form, which Renovate looks up as git-tags without release
-  // dates. The SDK takes no template updates, so the copier manager is off.
-  "copier": {
-    "enabled": false
-  },
-
   "lockFileMaintenance": {
     "enabled": true,
     "schedule": ["before 5am on monday"]