Issues

• Generate (and log) seed for rarefaction step

  Feature

  blekhmanlab/MicroBioMap#33 · Filter by author rabdill opened on May 5, 2026 · PCA projection 1.0
  

• Retrieve projection library from zenodo

  Feature

  blekhmanlab/MicroBioMap#31 · Filter by author rabdill opened on Apr 21, 2026 · PCA projection 1.0
  1

  

• Add projection web app documentation

  documentation
  blekhmanlab/MicroBioMap#30 · Filter by author rabdill opened on Apr 17, 2026 · PCA projection 1.0

• Document custom ordination process

  documentation
  blekhmanlab/MicroBioMap#29 · Filter by author rabdill opened on Apr 17, 2026 · PCA projection 1.0

• Add projection recipes

  documentation
  Feature

  blekhmanlab/MicroBioMap#27 · Filter by author rabdill opened on Apr 16, 2026 · PCA projection 1.0
  

• Add projection to vignette

  documentation
  blekhmanlab/MicroBioMap#26 · Filter by author rabdill opened on Apr 16, 2026 · PCA projection 1.0
  1

• Prep release of projection code

  Task

  blekhmanlab/MicroBioMap#25 · Filter by author rabdill opened on Apr 16, 2026 · PCA projection 1.0
  

• Examples of generating maps

  documentation
  Feature

  blekhmanlab/MicroBioMap#28 · Filter by author rabdill opened on Mar 17, 2026

• Define ordinations from custom taxon weights

  Feature

  blekhmanlab/MicroBioMap#24 · Filter by author rabdill opened on Feb 19, 2026 · PCA projection 1.0
  

• Define ordinations from custom subset of compendium

  Feature

  blekhmanlab/MicroBioMap#23 · Filter by author rabdill opened on Feb 19, 2026 · PCA projection 1.1
  

• Project user data using pre-calculated ordinarions

  Feature

  blekhmanlab/MicroBioMap#22 · Filter by author rabdill opened on Feb 19, 2026 · PCA projection 1.0
  2

  

• taxanomy information at strain level

  blekhmanlab/MicroBioMap#16 · Filter by author dugala239 opened on Feb 18, 2024
  6

• Clean up non-idiomatic code in vignette

  blekhmanlab/MicroBioMap#14 · Filter by author seandavi opened on Oct 21, 2023

• Taxonomic levels Genus names at Family rank

  blekhmanlab/MicroBioMap#13 · Filter by author microsud opened on Oct 16, 2023
  1

• Include "recipes" in vignette

  blekhmanlab/MicroBioMap#12 · Filter by author seandavi opened on Aug 29, 2023
  1

• Map organisms to Greengenes2

  blekhmanlab/MicroBioMap#10 · Filter by author seandavi opened on Aug 4, 2023
  

• Provide link for studies in compendium in BugSigDB

  blekhmanlab/MicroBioMap#9 · Filter by author seandavi opened on Aug 4, 2023
  1

  

• Co-occurrence visualization

  blekhmanlab/MicroBioMap#7 · Filter by author seandavi opened on Aug 1, 2023

• Background text for pipeline

  blekhmanlab/MicroBioMap#6 · Filter by author seandavi opened on Aug 1, 2023