Skip to content
@bnediction

BNediction

Research project on Predictive Boolean Network Ensembles funded by French ANR (ANR-20-CE45-0001)

Pinned Loading

  1. bonesis bonesis Public

    Synthesis and Reprogramming of Most Permissive Boolean Networks

    Python 17 4

  2. mpbn mpbn Public

    Brief Python implementation of Most Permissive Boolean Networks

    Python 20 3

  3. scBoolSeq scBoolSeq Public

    scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics

    Python 16 1

  4. BooleanNetworks.jl BooleanNetworks.jl Public

    Boolean networks in Julia

    Julia 7

Repositories

Showing 10 of 13 repositories
  • scbolt-case-studies Public

    Reproducible case studies for the scBOLT framework

    bnediction/scbolt-case-studies's past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Sep 30, 2026
  • scbolt Public

    Framework for Boolean network learning from multi-condition single-cell transcriptomes

    bnediction/scbolt's past year of commit activity
    Python 2 1 0 0 Updated Sep 25, 2026
  • bonesistools Public

    Python toolkit from omics data to executable models

    bnediction/bonesistools's past year of commit activity
    Python 3 1 0 0 Updated Sep 24, 2026
  • scBoolSeq Public

    scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics

    bnediction/scBoolSeq's past year of commit activity
    Python 16 1 1 0 Updated Sep 3, 2026
  • bonesis Public

    Synthesis and Reprogramming of Most Permissive Boolean Networks

    bnediction/bonesis's past year of commit activity
    Python 17 4 2 0 Updated Sep 1, 2026
  • mpbn Public

    Brief Python implementation of Most Permissive Boolean Networks

    bnediction/mpbn's past year of commit activity
    Python 20 3 0 0 Updated May 18, 2026
  • BooleanNetworks.jl Public

    Boolean networks in Julia

    bnediction/BooleanNetworks.jl's past year of commit activity
    Julia 7 MIT 0 0 0 Updated Mar 10, 2026
  • scBoolSeq-supplementary Public

    Notebooks demonstrating scBoolSeq for scRNA-Seq binarization and synthetic generation

    bnediction/scBoolSeq-supplementary's past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 28, 2024
  • bnediction.github.io Public

    BNediction webpage

    bnediction/bnediction.github.io's past year of commit activity
    HTML 0 0 0 0 Updated Jun 14, 2024
  • cegar-bonesis Public

    CEGAR for universal properties over minimal trap spaces of Boolean networks

    bnediction/cegar-bonesis's past year of commit activity
    Python 2 0 0 0 Updated Jul 11, 2023
View all repositories