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@mesoSPIM

mesoSPIM

Mesoscale light-sheet microscopes for imaging in cleared tissue.

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  1. benchtop-hardware benchtop-hardware Public

    Hardware documentation for mesoSPIM-Bechtop microscope project

    HTML 33 5

  2. mesoSPIM-control mesoSPIM-control Public

    Image acquisition software for mesoSPIM light-sheet microscopes.

    Python 49 20

  3. mesoSPIM-hardware-documentation mesoSPIM-hardware-documentation Public

    Hardware documentation for the mesoSPIM microscope project

    35 4

  4. mesoSPIM-PSFanalysis mesoSPIM-PSFanalysis Public

    Analysis code for light-sheet PSFs

    Jupyter Notebook 7

Repositories

Showing 10 of 12 repositories
  • mesoSPIM-control Public

    Image acquisition software for mesoSPIM light-sheet microscopes.

    mesoSPIM/mesoSPIM-control's past year of commit activity
    Python 49 GPL-3.0 20 1 1 Updated Oct 12, 2026
  • mesoSPIM-hardware-documentation Public

    Hardware documentation for the mesoSPIM microscope project

    mesoSPIM/mesoSPIM-hardware-documentation's past year of commit activity
    35 GPL-3.0 4 2 0 Updated Jun 17, 2026
  • benchtop-hardware Public

    Hardware documentation for mesoSPIM-Bechtop microscope project

    mesoSPIM/benchtop-hardware's past year of commit activity
    HTML 33 GPL-3.0 5 0 1 Updated May 11, 2026
  • image-processing Public

    Collection of python notebooks for mesoSPIM image processing (file format conversion, etc)

    mesoSPIM/image-processing's past year of commit activity
    Jupyter Notebook 1 GPL-3.0 0 0 0 Updated Feb 27, 2025
  • optical-simulations Public

    Proof of principle simulations of excitation and detection optical arms in mesoSPIM systems

    mesoSPIM/optical-simulations's past year of commit activity
    1 GPL-3.0 0 0 0 Updated May 30, 2024
  • mesoSPIM-PSFanalysis Public

    Analysis code for light-sheet PSFs

    mesoSPIM/mesoSPIM-PSFanalysis's past year of commit activity
    Jupyter Notebook 7 MIT 0 1 0 Updated Mar 18, 2024
  • mesoSPIM-lazy-loader Public

    Lazy loader napari plugin for mesoSPIM datasets

    mesoSPIM/mesoSPIM-lazy-loader's past year of commit activity
    Python 2 GPL-3.0 0 3 0 Updated Apr 6, 2023
  • mesoSPIM-python-tools Public

    Collection of general-purpose tools for handling mesoSPIM data with Python.

    mesoSPIM/mesoSPIM-python-tools's past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Apr 6, 2023
  • pipython Public Forked from royerlab/pipython

    PIPython is a collection of Python modules to access a PI device and process GCS data.

    mesoSPIM/pipython's past year of commit activity
    Python 0 3 0 0 Updated Oct 14, 2019
  • mesoSPIMmat Public

    MATLAB tools for handling mesoSPIM data

    mesoSPIM/mesoSPIMmat's past year of commit activity
    MATLAB 4 GPL-3.0 0 1 0 Updated Sep 16, 2019
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