Add dump_and_validate() config helper function - #85
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Copied from rsv repo which was copied from measles repo.¹ Adding it here to manage the function in a central location. I've included a comment to note the loosely coupled handling of "custom_rules". Given that "custom_rules" is implemented the same way in most (all?) downstream workflows, I think fine to add this for the sake of avoiding duplicate code. ¹ https://github.com/nextstrain/rsv/blob/148dad4c7369a223a33a47f60687f6a213d8937d/workflow/snakemake_rules/config.smk#L19-L40
joverlee521
approved these changes
Sep 9, 2026
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Description of proposed changes
Copied from rsv repo which was copied from measles repo.¹ Adding it here to manage the function in a central location.
I've included a comment to note the loosely coupled handling of "custom_rules". Given that "custom_rules" is implemented the same way in most (all?) downstream workflows, I think fine to add this for the sake of avoiding duplicate code.
¹ https://github.com/nextstrain/rsv/blob/148dad4c7369a223a33a47f60687f6a213d8937d/workflow/snakemake_rules/config.smk#L19-L40
Related issue(s)
nextstrain/public#46
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