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smithlabcode
dnmtools
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Threading bugfix for amrfinder
- #308
#308
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andrewdavidsmith
merged 7 commits into
master
smithlabcode/dnmtools:master
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amrfinder-threads-block-bounds
smithlabcode/dnmtools:amrfinder-threads-block-bounds
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Nov 18, 2025
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Threading bugfix for amrfinder
#308
andrewdavidsmith
merged 7 commits into
master
smithlabcode/dnmtools:master
from
amrfinder-threads-block-bounds
smithlabcode/dnmtools:amrfinder-threads-block-bounds
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Commits
Commits on Nov 17, 2025
src/amrfinder/amrfinder.cpp: fixing the block bounds which was causing a bug when more than one thread was used
andrewdavidsmith
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811cacd
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Commits on Nov 18, 2025
src/common/Interval6.hcpp and src/common/Interval.hcpp: adding these files to replace GenomicRegion from smithlab_cpp soon
andrewdavidsmith
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4956d33
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src/common/Interval6.hpp and src/common/Interval.hpp: making these work with c++17 for now
andrewdavidsmith
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fd068df
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configure.ac: new style m4 macro for setting c++ version
andrewdavidsmith
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69c56b3
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m4/ax_cxx_compile_stdcxx.m4: updating this macro
andrewdavidsmith
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2fdf04e
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Makefile.am: adding Interval and Interval6 to replace GenomicRegion eventually
andrewdavidsmith
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419fd7a
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src/amrfinder/amrfinder.cpp: making this work with c++17 for now
andrewdavidsmith
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39a651e
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