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https://www.sc-best-practices.org
Jupyter Notebook 1.3k 277
RNA Velocity generalized through dynamical modeling
Python 507 114
Reference mapping for single-cell genomics
Jupyter Notebook 407 71
Benchmarking analysis of data integration tools
Python 428 76
Electronic Health Record Analysis with Python.
Python 362 53
Multi-omic single-cell optimal transport tools
Python 216 16
Scalable framework for integrating single-cell omics with genetic data using AnnData.
A dashboard of everything in the theislab GitHub repository
InterScale's reproducibility repository.
A datastructure for EHR data
Convert between AnnData and SingleCellExperiment
Collection of Sphinx extensions similar to (but more flexible than) numpydoc
Package for the analysis of Transcripts outside segmented cells in ST data
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