cell-communication

MCP server for spatial transcriptomics analysis through natural language interfaces.

拟南芥根单细胞RNA-seq分析：细胞图谱、发育轨迹与细胞通讯

[Donor] Fast Cell-Cell Communication Analysis with Statistical Framework | 快速CCI统计

Generate Sankey plots from merged CellChat objects

[Donor] Metabolite-Mediated Cell Communication Analysis | 代谢物通讯

Customize your specific organism cellchatdb

[Donor] Identify Novel Cell-Cell Interactions in scRNA-seq | 新型CCI

[Donor] Spatial transcriptomics cell communication

[Donor] CCI-phenotype association framework for scRNA/spatial

[Donor] Differential abundance testing on KNN graphs — TME cell population comparison

Yale Collab with Aarthi (Smita Krishnaswamy group) where I built signalling knowledge graphs to capture cell communications.

[Donor] Multi-sample NicheNet ligand-target analysis

[Donor] Cell-cell communication analysis

OpenBio 2026 Datathon: Maternal-Fetal Cell Communication in Preeclampsia

[Donor] Unified ligand-receptor interaction framework

[Donor] Temporal Cell-Cell Interaction Analysis in scRNA-seq | 伪时序细胞通讯

[Donor] CCI in Spatial Transcriptomics via Optimal Transport | 空间CCI

Evidence-based reconstruction of cell-to-cell communication from a human pituitary somatotroph to an adipocyte via GH1 and GHR, using Human Protein Atlas, OmniPath, STRING, and IntAct. Includes data, figures, and interpretation separated from database results.

Information-theoretic cell-cell communication analysis from single-cell RNA-seq using KSG mutual information channel capacity