image-analysis-and-processing

Segment Source Distribution

Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.

Package to make analysis of transmission electron microscopy images simple.

A unified framework for example-based texture synthesis, developed alongside my master's thesis.

An ontology of imaging and related techniques and technologies, image processing and analysis, image data and formats, within bio- and other sciences.

Teaching materials for Boston Bioimage Analysis Course (BoBiAC).

Rolling release code for the nTracer ImageJ/Fiji plugin, as published in: Roossien DH, et. al, Bioinformatics 2019.

A simple Django web app that enables users to upload and download images securely. It handles image storage, validation, and generates download links. Built with Django’s MVC architecture, it provides a clean interface and can be extended for advanced file management.

PictoSINT — An image-focused OSINT and intelligence toolkit for metadata analysis, visual investigation, geolocation research, and digital forensics.

Example of how to use MATLAB Experiment Manager to manipulate very large images in the context of computational pathology (CPATH).

For raw data file conversion of created SPM images. To make raw data specific software accessible to more data types.

Analysis of SDS-PAGE images to find the intensity of bands and machine learning was used to predict the class of validation data

takes Heidelberg DICOM export files and opens a heyex style viewer allowing for bscan to enface marking

Segmentation of nuclei, chloroplasts or both, and remaining regions. Area, mean intensity, histograms export.

Automatic detection of buildings in satellite images

Package for analysis of sensor plant data, based on microscopic images

面向人像摄影的照片分析与相机反推工具。 将 2D 姿态/构图分析、保守的相机参数估计、可编辑的 3D 场景重建，以及参考图拍摄指导整合在一起

Coursework in Image Analysis and Computer Vision - DD2423 @ KTH Royal Institute of Technology